Cluster: HRGMv2_4312_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4312
- CGC Family ID: CGCFAM_00199
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4312_5 | HRGMv2_4312_5_42 | 45255 | 47090 | - | GH13_4 |
| CAZyme | HRGMv2_4312_5 | HRGMv2_4312_5_43 | 47118 | 49298 | - | GH36 |
| TC | HRGMv2_4312_5 | HRGMv2_4312_5_44 | 49401 | 50249 | - | 3.A.1.1.28 |
| TC | HRGMv2_4312_5 | HRGMv2_4312_5_45 | 50249 | 51115 | - | 3.A.1.1.28 |
| TC | HRGMv2_4312_5 | HRGMv2_4312_5_46 | 51134 | 52426 | - | 3.A.1.1.28 |
| TF | HRGMv2_4312_5 | HRGMv2_4312_5_47 | 52629 | 53483 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4312_5 | HRGMv2_4312_5_48 | 53517 | 55766 | - | GH36 |
Gene ID: HRGMv2_4312_5_42
Type: CAZyme
Location: 45255 - 47090 (-)
Type: CAZyme
Location: 45255 - 47090 (-)
Gene ID: HRGMv2_4312_5_43
Type: CAZyme
Location: 47118 - 49298 (-)
Type: CAZyme
Location: 47118 - 49298 (-)
Gene ID: HRGMv2_4312_5_44
Type: TC
Location: 49401 - 50249 (-)
Type: TC
Location: 49401 - 50249 (-)
Gene ID: HRGMv2_4312_5_45
Type: TC
Location: 50249 - 51115 (-)
Type: TC
Location: 50249 - 51115 (-)
Gene ID: HRGMv2_4312_5_46
Type: TC
Location: 51134 - 52426 (-)
Type: TC
Location: 51134 - 52426 (-)
Gene ID: HRGMv2_4312_5_47
Type: TF
Location: 52629 - 53483 (+)
Type: TF
Location: 52629 - 53483 (+)
Gene ID: HRGMv2_4312_5_48
Type: CAZyme
Location: 53517 - 55766 (-)
Type: CAZyme
Location: 53517 - 55766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B sp019423745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.