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Cluster: HRGMv2_4312_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4312_30 HRGMv2_4312_30_15 14646 15734 + 8.A.59.4.1
pfam HRGMv2_4312_30 HRGMv2_4312_30_16 15731 16096 + Hpt
TC HRGMv2_4312_30 HRGMv2_4312_30_17 16111 18633 + 2.A.21.9.2
CAZyme HRGMv2_4312_30 HRGMv2_4312_30_18 18998 21454 + GH39
TC HRGMv2_4312_30 HRGMv2_4312_30_19 21643 23037 + 2.A.2.3.3
CAZyme HRGMv2_4312_30 HRGMv2_4312_30_20 23114 23890 + CE1
CAZyme HRGMv2_4312_30 HRGMv2_4312_30_21 23934 26420 + GH3
TC HRGMv2_4312_30 HRGMv2_4312_30_22 26961 27872 + 3.A.1.131.1
Gene ID: HRGMv2_4312_30_15
Type: TC
Location: 14646 - 15734 (+)
Gene ID: HRGMv2_4312_30_16
Type: pfam
Location: 15731 - 16096 (+)
Gene ID: HRGMv2_4312_30_17
Type: TC
Location: 16111 - 18633 (+)
Gene ID: HRGMv2_4312_30_18
Type: CAZyme
Location: 18998 - 21454 (+)
Gene ID: HRGMv2_4312_30_19
Type: TC
Location: 21643 - 23037 (+)
Gene ID: HRGMv2_4312_30_20
Type: CAZyme
Location: 23114 - 23890 (+)
Gene ID: HRGMv2_4312_30_21
Type: CAZyme
Location: 23934 - 26420 (+)
Gene ID: HRGMv2_4312_30_22
Type: TC
Location: 26961 - 27872 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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