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Cluster: HRGMv2_4312_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4312_13 HRGMv2_4312_13_6 8137 9027 + 3.A.1.1.41
TC HRGMv2_4312_13 HRGMv2_4312_13_7 9042 9914 + 3.A.1.1.18
pfam HRGMv2_4312_13 HRGMv2_4312_13_8 9928 10095 + DUF6903
TF HRGMv2_4312_13 HRGMv2_4312_13_9 10170 11144 - HTH_AraC
CAZyme HRGMv2_4312_13 HRGMv2_4312_13_10 11452 12738 + GH109
STP HRGMv2_4312_13 HRGMv2_4312_13_11 12758 14059 + SBP_bac_1
TC HRGMv2_4312_13 HRGMv2_4312_13_12 14062 14940 + 3.A.1.1.11
TC HRGMv2_4312_13 HRGMv2_4312_13_13 14940 15776 + 3.A.1.1.39
Gene ID: HRGMv2_4312_13_6
Type: TC
Location: 8137 - 9027 (+)
Gene ID: HRGMv2_4312_13_7
Type: TC
Location: 9042 - 9914 (+)
Gene ID: HRGMv2_4312_13_8
Type: pfam
Location: 9928 - 10095 (+)
Gene ID: HRGMv2_4312_13_9
Type: TF
Location: 10170 - 11144 (-)
Gene ID: HRGMv2_4312_13_10
Type: CAZyme
Location: 11452 - 12738 (+)
Gene ID: HRGMv2_4312_13_11
Type: STP
Location: 12758 - 14059 (+)
Gene ID: HRGMv2_4312_13_12
Type: TC
Location: 14062 - 14940 (+)
Gene ID: HRGMv2_4312_13_13
Type: TC
Location: 14940 - 15776 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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