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Cluster: HRGMv2_4312_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4312_12 HRGMv2_4312_12_5 2982 4019 - GT2
CAZyme HRGMv2_4312_12 HRGMv2_4312_12_6 4012 5085 - GT2
pfam HRGMv2_4312_12 HRGMv2_4312_12_7 5102 6166 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | GDP_Man_Dehyd
pfam HRGMv2_4312_12 HRGMv2_4312_12_8 6179 7063 - Glycos_transf_2
TC HRGMv2_4312_12 HRGMv2_4312_12_9 7087 8544 - 2.A.66.5.2
CAZyme HRGMv2_4312_12 HRGMv2_4312_12_10 8841 13712 - CBM67 | GH78
peptidase HRGMv2_4312_12 HRGMv2_4312_12_11 13808 16564 - C82.UPA
CAZyme HRGMv2_4312_12 HRGMv2_4312_12_12 16592 19069 - GH25
CAZyme HRGMv2_4312_12 HRGMv2_4312_12_13 19112 21703 - GH73
Gene ID: HRGMv2_4312_12_5
Type: CAZyme
Location: 2982 - 4019 (-)
Gene ID: HRGMv2_4312_12_6
Type: CAZyme
Location: 4012 - 5085 (-)
Gene ID: HRGMv2_4312_12_7
Type: pfam
Location: 5102 - 6166 (-)
Gene ID: HRGMv2_4312_12_8
Type: pfam
Location: 6179 - 7063 (-)
Gene ID: HRGMv2_4312_12_9
Type: TC
Location: 7087 - 8544 (-)
Gene ID: HRGMv2_4312_12_10
Type: CAZyme
Location: 8841 - 13712 (-)
Gene ID: HRGMv2_4312_12_11
Type: peptidase
Location: 13808 - 16564 (-)
Gene ID: HRGMv2_4312_12_12
Type: CAZyme
Location: 16592 - 19069 (-)
Gene ID: HRGMv2_4312_12_13
Type: CAZyme
Location: 19112 - 21703 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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