Cluster: HRGMv2_4311_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4311
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4311_36 | HRGMv2_4311_36_5 | 2541 | 5750 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4311_36 | HRGMv2_4311_36_6 | 5747 | 6595 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4311_36 | HRGMv2_4311_36_7 | 6592 | 7947 | - | 3.A.1.103.6 |
| TC | HRGMv2_4311_36 | HRGMv2_4311_36_8 | 7957 | 8802 | - | 3.A.1.104.2 |
Gene ID: HRGMv2_4311_36_5
Type: CAZyme
Location: 2541 - 5750 (-)
Type: CAZyme
Location: 2541 - 5750 (-)
Gene ID: HRGMv2_4311_36_6
Type:
Location: 5747 - 6595 (-)
Type:
Location: 5747 - 6595 (-)
Gene ID: HRGMv2_4311_36_7
Type: TC
Location: 6592 - 7947 (-)
Type: TC
Location: 6592 - 7947 (-)
Gene ID: HRGMv2_4311_36_8
Type: TC
Location: 7957 - 8802 (-)
Type: TC
Location: 7957 - 8802 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.