Cluster: HRGMv2_4311_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4311
- CGC Family ID: CGCFAM_03053
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4311_34 | HRGMv2_4311_34_2 | 1485 | 3122 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | HRGMv2_4311_34 | HRGMv2_4311_34_3 | 3257 | 3814 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4311_34 | HRGMv2_4311_34_4 | 4051 | 4266 | - | CSD |
| CAZyme | HRGMv2_4311_34 | HRGMv2_4311_34_5 | 4566 | 6065 | - | GH77 |
Gene ID: HRGMv2_4311_34_2
Type: TC
Location: 1485 - 3122 (-)
Type: TC
Location: 1485 - 3122 (-)
Gene ID: HRGMv2_4311_34_3
Type:
Location: 3257 - 3814 (-)
Type:
Location: 3257 - 3814 (-)
Gene ID: HRGMv2_4311_34_4
Type: TF
Location: 4051 - 4266 (-)
Type: TF
Location: 4051 - 4266 (-)
Gene ID: HRGMv2_4311_34_5
Type: CAZyme
Location: 4566 - 6065 (-)
Type: CAZyme
Location: 4566 - 6065 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.