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Cluster: HRGMv2_4311_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4311_15 HRGMv2_4311_15_2 430 1215 - 3.A.1.16.2
TC HRGMv2_4311_15 HRGMv2_4311_15_3 1215 2291 - 3.A.1.12.1
pfam HRGMv2_4311_15 HRGMv2_4311_15_4 2557 3762 + FtsX | MacB_PCD
TC HRGMv2_4311_15 HRGMv2_4311_15_5 3764 4444 + 3.A.1.122.6
pfam HRGMv2_4311_15 HRGMv2_4311_15_6 4488 4910 + DUF4418
NULL(UNKNOWN) HRGMv2_4311_15 HRGMv2_4311_15_7 5067 5357 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4311_15 HRGMv2_4311_15_8 5389 6267 - 9.B.34.1.4
TC HRGMv2_4311_15 HRGMv2_4311_15_9 6870 9503 - 4.A.2.1.17
pfam HRGMv2_4311_15 HRGMv2_4311_15_10 9757 10215 - DUF212
CAZyme HRGMv2_4311_15 HRGMv2_4311_15_11 10229 11674 - GT5
Gene ID: HRGMv2_4311_15_2
Type: TC
Location: 430 - 1215 (-)
Gene ID: HRGMv2_4311_15_3
Type: TC
Location: 1215 - 2291 (-)
Gene ID: HRGMv2_4311_15_4
Type: pfam
Location: 2557 - 3762 (+)
Gene ID: HRGMv2_4311_15_5
Type: TC
Location: 3764 - 4444 (+)
Gene ID: HRGMv2_4311_15_6
Type: pfam
Location: 4488 - 4910 (+)
Gene ID: HRGMv2_4311_15_7
Type:
Location: 5067 - 5357 (-)
Gene ID: HRGMv2_4311_15_8
Type: TC
Location: 5389 - 6267 (-)
Gene ID: HRGMv2_4311_15_9
Type: TC
Location: 6870 - 9503 (-)
Gene ID: HRGMv2_4311_15_10
Type: pfam
Location: 9757 - 10215 (-)
Gene ID: HRGMv2_4311_15_11
Type: CAZyme
Location: 10229 - 11674 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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