Cluster: HRGMv2_4311_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4311
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4311_14 | HRGMv2_4311_14_8 | 7724 | 8842 | + | GT2 |
| CAZyme | HRGMv2_4311_14 | HRGMv2_4311_14_9 | 8860 | 11067 | + | GT2 | GT2 |
| CAZyme | HRGMv2_4311_14 | HRGMv2_4311_14_10 | 11051 | 12052 | + | GT2 |
| TC | HRGMv2_4311_14 | HRGMv2_4311_14_11 | 12209 | 13627 | + | 9.B.18.1.1 |
Gene ID: HRGMv2_4311_14_8
Type: CAZyme
Location: 7724 - 8842 (+)
Type: CAZyme
Location: 7724 - 8842 (+)
Gene ID: HRGMv2_4311_14_9
Type: CAZyme
Location: 8860 - 11067 (+)
Type: CAZyme
Location: 8860 - 11067 (+)
Gene ID: HRGMv2_4311_14_10
Type: CAZyme
Location: 11051 - 12052 (+)
Type: CAZyme
Location: 11051 - 12052 (+)
Gene ID: HRGMv2_4311_14_11
Type: TC
Location: 12209 - 13627 (+)
Type: TC
Location: 12209 - 13627 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.