Cluster: HRGMv2_4311_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4311
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4311_150 | HRGMv2_4311_150_3 | 2241 | 2849 | + | 9.B.104.1.3 |
| pfam | HRGMv2_4311_150 | HRGMv2_4311_150_4 | 2854 | 3270 | + | HIT | DcpS_C |
| STP | HRGMv2_4311_150 | HRGMv2_4311_150_5 | 3298 | 3843 | + | Sigma70_r4_2 |
| CAZyme | HRGMv2_4311_150 | HRGMv2_4311_150_6 | 3825 | 4907 | - | GT28 |
Gene ID: HRGMv2_4311_150_3
Type: TC
Location: 2241 - 2849 (+)
Type: TC
Location: 2241 - 2849 (+)
Gene ID: HRGMv2_4311_150_4
Type: pfam
Location: 2854 - 3270 (+)
Type: pfam
Location: 2854 - 3270 (+)
Gene ID: HRGMv2_4311_150_5
Type: STP
Location: 3298 - 3843 (+)
Type: STP
Location: 3298 - 3843 (+)
Gene ID: HRGMv2_4311_150_6
Type: CAZyme
Location: 3825 - 4907 (-)
Type: CAZyme
Location: 3825 - 4907 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.