Cluster: HRGMv2_4311_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4311
- CGC Family ID: CGCFAM_10523
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4311_130 | HRGMv2_4311_130_3 | 1601 | 2614 | + | 3.A.1.14.11 |
| TC | HRGMv2_4311_130 | HRGMv2_4311_130_4 | 2611 | 3408 | + | 3.A.1.14.11 |
| CAZyme | HRGMv2_4311_130 | HRGMv2_4311_130_5 | 3504 | 4523 | + | GT2 |
| TC | HRGMv2_4311_130 | HRGMv2_4311_130_6 | 4610 | 5890 | - | 2.A.66.1.26 |
Gene ID: HRGMv2_4311_130_3
Type: TC
Location: 1601 - 2614 (+)
Type: TC
Location: 1601 - 2614 (+)
Gene ID: HRGMv2_4311_130_4
Type: TC
Location: 2611 - 3408 (+)
Type: TC
Location: 2611 - 3408 (+)
Gene ID: HRGMv2_4311_130_5
Type: CAZyme
Location: 3504 - 4523 (+)
Type: CAZyme
Location: 3504 - 4523 (+)
Gene ID: HRGMv2_4311_130_6
Type: TC
Location: 4610 - 5890 (-)
Type: TC
Location: 4610 - 5890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.