Cluster: HRGMv2_4311_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4311
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4311_110 | HRGMv2_4311_110_2 | 1370 | 2791 | + | 2.A.118.1.3 |
| STP | HRGMv2_4311_110 | HRGMv2_4311_110_3 | 3019 | 4110 | + | PALP |
| TC | HRGMv2_4311_110 | HRGMv2_4311_110_4 | 4138 | 5235 | - | 2.A.86.1.3 |
| CAZyme | HRGMv2_4311_110 | HRGMv2_4311_110_5 | 5287 | 6579 | - | CE4 |
Gene ID: HRGMv2_4311_110_2
Type: TC
Location: 1370 - 2791 (+)
Type: TC
Location: 1370 - 2791 (+)
Gene ID: HRGMv2_4311_110_3
Type: STP
Location: 3019 - 4110 (+)
Type: STP
Location: 3019 - 4110 (+)
Gene ID: HRGMv2_4311_110_4
Type: TC
Location: 4138 - 5235 (-)
Type: TC
Location: 4138 - 5235 (-)
Gene ID: HRGMv2_4311_110_5
Type: CAZyme
Location: 5287 - 6579 (-)
Type: CAZyme
Location: 5287 - 6579 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.