Cluster: HRGMv2_4311_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: HRGMv2_4311
- CGC Family ID: CGCFAM_00484
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4311_107 | HRGMv2_4311_107_3 | 1244 | 2353 | - | 3.A.1.1.26 |
| TF | HRGMv2_4311_107 | HRGMv2_4311_107_4 | 2442 | 3461 | - | LacI |
| CAZyme | HRGMv2_4311_107 | HRGMv2_4311_107_5 | 3474 | 6482 | - | GH2 |
Gene ID: HRGMv2_4311_107_3
Type: TC
Location: 1244 - 2353 (-)
Type: TC
Location: 1244 - 2353 (-)
Gene ID: HRGMv2_4311_107_4
Type: TF
Location: 2442 - 3461 (-)
Type: TF
Location: 2442 - 3461 (-)
Gene ID: HRGMv2_4311_107_5
Type: CAZyme
Location: 3474 - 6482 (-)
Type: CAZyme
Location: 3474 - 6482 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.