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Cluster: HRGMv2_4309_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4309_44 HRGMv2_4309_44_15 13740 15506 + 3.A.2.2.2
TC HRGMv2_4309_44 HRGMv2_4309_44_16 15507 16880 + 3.A.2.2.2
TC HRGMv2_4309_44 HRGMv2_4309_44_17 16895 17560 + 3.A.2.2.2
peptidase HRGMv2_4309_44 HRGMv2_4309_44_18 17673 19403 + S08.039
TC HRGMv2_4309_44 HRGMv2_4309_44_19 19565 20965 + 2.A.40.2.1
pfam HRGMv2_4309_44 HRGMv2_4309_44_20 21009 22241 - PFK
CAZyme HRGMv2_4309_44 HRGMv2_4309_44_21 22646 24805 + CBM67 | GH78
Gene ID: HRGMv2_4309_44_15
Type: TC
Location: 13740 - 15506 (+)
Gene ID: HRGMv2_4309_44_16
Type: TC
Location: 15507 - 16880 (+)
Gene ID: HRGMv2_4309_44_17
Type: TC
Location: 16895 - 17560 (+)
Gene ID: HRGMv2_4309_44_18
Type: peptidase
Location: 17673 - 19403 (+)
Gene ID: HRGMv2_4309_44_19
Type: TC
Location: 19565 - 20965 (+)
Gene ID: HRGMv2_4309_44_20
Type: pfam
Location: 21009 - 22241 (-)
Gene ID: HRGMv2_4309_44_21
Type: CAZyme
Location: 22646 - 24805 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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