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Cluster: HRGMv2_4309_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4309_34 HRGMv2_4309_34_2 2134 2982 + GH25
NULL(UNKNOWN) HRGMv2_4309_34 HRGMv2_4309_34_3 3037 3654 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4309_34 HRGMv2_4309_34_4 3654 4181 + 9.B.156.3.1
pfam HRGMv2_4309_34 HRGMv2_4309_34_5 4178 4918 - Acyltransferase
pfam HRGMv2_4309_34 HRGMv2_4309_34_6 5086 5493 + PrcB_C
CAZyme HRGMv2_4309_34 HRGMv2_4309_34_7 5512 7071 + CBM50
pfam HRGMv2_4309_34 HRGMv2_4309_34_8 7185 8066 + GHMP_kinases_N | GHMP_kinases_C
TF HRGMv2_4309_34 HRGMv2_4309_34_9 8056 8757 + GntR
TC HRGMv2_4309_34 HRGMv2_4309_34_10 8855 10336 + 9.A.11.1.2
Gene ID: HRGMv2_4309_34_2
Type: CAZyme
Location: 2134 - 2982 (+)
Gene ID: HRGMv2_4309_34_3
Type:
Location: 3037 - 3654 (+)
Gene ID: HRGMv2_4309_34_4
Type: TC
Location: 3654 - 4181 (+)
Gene ID: HRGMv2_4309_34_5
Type: pfam
Location: 4178 - 4918 (-)
Gene ID: HRGMv2_4309_34_6
Type: pfam
Location: 5086 - 5493 (+)
Gene ID: HRGMv2_4309_34_7
Type: CAZyme
Location: 5512 - 7071 (+)
Gene ID: HRGMv2_4309_34_8
Type: pfam
Location: 7185 - 8066 (+)
Gene ID: HRGMv2_4309_34_9
Type: TF
Location: 8056 - 8757 (+)
Gene ID: HRGMv2_4309_34_10
Type: TC
Location: 8855 - 10336 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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