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Cluster: HRGMv2_4309_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4309_31 HRGMv2_4309_31_22 26472 27734 + 3.A.1.1.4
TC HRGMv2_4309_31 HRGMv2_4309_31_23 27856 28734 + 3.A.1.1.4
TC HRGMv2_4309_31 HRGMv2_4309_31_24 28731 29537 + 3.A.1.1.4
TF HRGMv2_4309_31 HRGMv2_4309_31_25 29710 30735 + LacI
CAZyme HRGMv2_4309_31 HRGMv2_4309_31_26 30749 32764 + GH42
pfam HRGMv2_4309_31 HRGMv2_4309_31_27 32885 33556 + Asp_Glu_race
pfam HRGMv2_4309_31 HRGMv2_4309_31_28 33575 34045 + Beta-AFase-like_GH127_cat
CAZyme HRGMv2_4309_31 HRGMv2_4309_31_29 34102 35526 + GH127
Gene ID: HRGMv2_4309_31_22
Type: TC
Location: 26472 - 27734 (+)
Gene ID: HRGMv2_4309_31_23
Type: TC
Location: 27856 - 28734 (+)
Gene ID: HRGMv2_4309_31_24
Type: TC
Location: 28731 - 29537 (+)
Gene ID: HRGMv2_4309_31_25
Type: TF
Location: 29710 - 30735 (+)
Gene ID: HRGMv2_4309_31_26
Type: CAZyme
Location: 30749 - 32764 (+)
Gene ID: HRGMv2_4309_31_27
Type: pfam
Location: 32885 - 33556 (+)
Gene ID: HRGMv2_4309_31_28
Type: pfam
Location: 33575 - 34045 (+)
Gene ID: HRGMv2_4309_31_29
Type: CAZyme
Location: 34102 - 35526 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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