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Cluster: HRGMv2_4309_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4309_25 HRGMv2_4309_25_27 27655 29277 - 8.A.7.1.1
TC HRGMv2_4309_25 HRGMv2_4309_25_28 29296 30324 - 3.A.1.11.7
TC HRGMv2_4309_25 HRGMv2_4309_25_29 30381 31187 - 3.A.1.11.1
TC HRGMv2_4309_25 HRGMv2_4309_25_30 31184 32038 - 3.A.1.11.1
TC HRGMv2_4309_25 HRGMv2_4309_25_31 32031 33113 - 3.A.1.11.1
peptidase HRGMv2_4309_25 HRGMv2_4309_25_32 33134 34438 - M20.UND
CAZyme HRGMv2_4309_25 HRGMv2_4309_25_33 34829 37036 - CBM48 | GH13_9
Gene ID: HRGMv2_4309_25_27
Type: TC
Location: 27655 - 29277 (-)
Gene ID: HRGMv2_4309_25_28
Type: TC
Location: 29296 - 30324 (-)
Gene ID: HRGMv2_4309_25_29
Type: TC
Location: 30381 - 31187 (-)
Gene ID: HRGMv2_4309_25_30
Type: TC
Location: 31184 - 32038 (-)
Gene ID: HRGMv2_4309_25_31
Type: TC
Location: 32031 - 33113 (-)
Gene ID: HRGMv2_4309_25_32
Type: peptidase
Location: 33134 - 34438 (-)
Gene ID: HRGMv2_4309_25_33
Type: CAZyme
Location: 34829 - 37036 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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