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Cluster: HRGMv2_4309_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4309_24 HRGMv2_4309_24_12 15894 17429 - CE20
TC HRGMv2_4309_24 HRGMv2_4309_24_13 17502 18464 - 3.A.1.5.15
TC HRGMv2_4309_24 HRGMv2_4309_24_14 18461 19465 - 3.A.1.5.2
TC HRGMv2_4309_24 HRGMv2_4309_24_15 19479 20345 - 3.A.1.5.11
TC HRGMv2_4309_24 HRGMv2_4309_24_16 20345 21313 - 3.A.1.5.11
Gene ID: HRGMv2_4309_24_12
Type: CAZyme
Location: 15894 - 17429 (-)
Gene ID: HRGMv2_4309_24_13
Type: TC
Location: 17502 - 18464 (-)
Gene ID: HRGMv2_4309_24_14
Type: TC
Location: 18461 - 19465 (-)
Gene ID: HRGMv2_4309_24_15
Type: TC
Location: 19479 - 20345 (-)
Gene ID: HRGMv2_4309_24_16
Type: TC
Location: 20345 - 21313 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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