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Cluster: HRGMv2_4309_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4309_23 HRGMv2_4309_23_31 39228 39632 - CBM4
CAZyme HRGMv2_4309_23 HRGMv2_4309_23_32 39661 42096 - CBM4 | CBM4 | CBM4 | GH16_3
NULL(UNKNOWN) HRGMv2_4309_23 HRGMv2_4309_23_33 42038 42268 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4309_23 HRGMv2_4309_23_34 42265 44712 - GH3
TC HRGMv2_4309_23 HRGMv2_4309_23_35 44825 45670 - 3.A.1.1.13
TC HRGMv2_4309_23 HRGMv2_4309_23_36 45674 46630 - 3.A.1.1.4
NULL(UNKNOWN) HRGMv2_4309_23 HRGMv2_4309_23_37 46697 48079 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4309_23 HRGMv2_4309_23_38 48326 51025 + GH94
CAZyme HRGMv2_4309_23 HRGMv2_4309_23_39 51053 53467 + GH94
Gene ID: HRGMv2_4309_23_31
Type: CAZyme
Location: 39228 - 39632 (-)
Gene ID: HRGMv2_4309_23_32
Type: CAZyme
Location: 39661 - 42096 (-)
Gene ID: HRGMv2_4309_23_33
Type:
Location: 42038 - 42268 (-)
Gene ID: HRGMv2_4309_23_34
Type: CAZyme
Location: 42265 - 44712 (-)
Gene ID: HRGMv2_4309_23_35
Type: TC
Location: 44825 - 45670 (-)
Gene ID: HRGMv2_4309_23_36
Type: TC
Location: 45674 - 46630 (-)
Gene ID: HRGMv2_4309_23_37
Type:
Location: 46697 - 48079 (-)
Gene ID: HRGMv2_4309_23_38
Type: CAZyme
Location: 48326 - 51025 (+)
Gene ID: HRGMv2_4309_23_39
Type: CAZyme
Location: 51053 - 53467 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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