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Cluster: HRGMv2_4309_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4309_21 HRGMv2_4309_21_25 35074 36384 + 3.A.1.1.28
TC HRGMv2_4309_21 HRGMv2_4309_21_26 36381 37262 + 3.A.1.1.28
TC HRGMv2_4309_21 HRGMv2_4309_21_27 37262 38110 + 3.A.1.1.28
CAZyme HRGMv2_4309_21 HRGMv2_4309_21_28 38153 40342 + GH36
TF HRGMv2_4309_21 HRGMv2_4309_21_29 40524 40874 + HTH_3
peptidase HRGMv2_4309_21 HRGMv2_4309_21_30 40867 41733 + M78.UPW
TC HRGMv2_4309_21 HRGMv2_4309_21_31 41827 42153 - 2.A.78.1.1
TC HRGMv2_4309_21 HRGMv2_4309_21_32 42150 42863 - 2.A.78.1.1
Gene ID: HRGMv2_4309_21_25
Type: TC
Location: 35074 - 36384 (+)
Gene ID: HRGMv2_4309_21_26
Type: TC
Location: 36381 - 37262 (+)
Gene ID: HRGMv2_4309_21_27
Type: TC
Location: 37262 - 38110 (+)
Gene ID: HRGMv2_4309_21_28
Type: CAZyme
Location: 38153 - 40342 (+)
Gene ID: HRGMv2_4309_21_29
Type: TF
Location: 40524 - 40874 (+)
Gene ID: HRGMv2_4309_21_30
Type: peptidase
Location: 40867 - 41733 (+)
Gene ID: HRGMv2_4309_21_31
Type: TC
Location: 41827 - 42153 (-)
Gene ID: HRGMv2_4309_21_32
Type: TC
Location: 42150 - 42863 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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