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Cluster: HRGMv2_4309_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4309_21 HRGMv2_4309_21_11 13343 14278 + 3.A.1.1.10
TC HRGMv2_4309_21 HRGMv2_4309_21_12 14294 15181 + 3.A.1.1.29
CAZyme HRGMv2_4309_21 HRGMv2_4309_21_13 15280 17439 + GH106
CAZyme HRGMv2_4309_21 HRGMv2_4309_21_14 17432 20068 + GH3
pfam HRGMv2_4309_21 HRGMv2_4309_21_15 20218 21759 + Apiosidase | DUF5060 | DUF5605
CAZyme HRGMv2_4309_21 HRGMv2_4309_21_16 21855 23387 + GH43_35
CAZyme HRGMv2_4309_21 HRGMv2_4309_21_17 23440 24498 + GH43_24
CAZyme HRGMv2_4309_21 HRGMv2_4309_21_18 24542 26947 + GH3
pfam HRGMv2_4309_21 HRGMv2_4309_21_19 26934 28511 + Apiosidase | DUF5060 | DUF5605
CAZyme HRGMv2_4309_21 HRGMv2_4309_21_20 28633 29451 + GH78
CAZyme HRGMv2_4309_21 HRGMv2_4309_21_21 29469 31964 + GH2
Gene ID: HRGMv2_4309_21_11
Type: TC
Location: 13343 - 14278 (+)
Gene ID: HRGMv2_4309_21_12
Type: TC
Location: 14294 - 15181 (+)
Gene ID: HRGMv2_4309_21_13
Type: CAZyme
Location: 15280 - 17439 (+)
Gene ID: HRGMv2_4309_21_14
Type: CAZyme
Location: 17432 - 20068 (+)
Gene ID: HRGMv2_4309_21_15
Type: pfam
Location: 20218 - 21759 (+)
Gene ID: HRGMv2_4309_21_16
Type: CAZyme
Location: 21855 - 23387 (+)
Gene ID: HRGMv2_4309_21_17
Type: CAZyme
Location: 23440 - 24498 (+)
Gene ID: HRGMv2_4309_21_18
Type: CAZyme
Location: 24542 - 26947 (+)
Gene ID: HRGMv2_4309_21_19
Type: pfam
Location: 26934 - 28511 (+)
Gene ID: HRGMv2_4309_21_20
Type: CAZyme
Location: 28633 - 29451 (+)
Gene ID: HRGMv2_4309_21_21
Type: CAZyme
Location: 29469 - 31964 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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