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Cluster: HRGMv2_4309_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4309_17 HRGMv2_4309_17_33 29440 30189 + 9.B.158.1.2
pfam HRGMv2_4309_17 HRGMv2_4309_17_34 30214 30999 - ABC2_membrane_2 | ABC2_membrane_5
TC HRGMv2_4309_17 HRGMv2_4309_17_35 30996 31877 - 3.A.1.126.1
pfam HRGMv2_4309_17 HRGMv2_4309_17_36 32059 32940 + Lactamase_B
TF HRGMv2_4309_17 HRGMv2_4309_17_37 32962 33957 - LacI
CAZyme HRGMv2_4309_17 HRGMv2_4309_17_38 34287 36548 + GT35
CAZyme HRGMv2_4309_17 HRGMv2_4309_17_39 36583 38037 + GH77
TC HRGMv2_4309_17 HRGMv2_4309_17_40 38272 39210 + 3.A.1.130.1
Gene ID: HRGMv2_4309_17_33
Type: TC
Location: 29440 - 30189 (+)
Gene ID: HRGMv2_4309_17_34
Type: pfam
Location: 30214 - 30999 (-)
Gene ID: HRGMv2_4309_17_35
Type: TC
Location: 30996 - 31877 (-)
Gene ID: HRGMv2_4309_17_36
Type: pfam
Location: 32059 - 32940 (+)
Gene ID: HRGMv2_4309_17_37
Type: TF
Location: 32962 - 33957 (-)
Gene ID: HRGMv2_4309_17_38
Type: CAZyme
Location: 34287 - 36548 (+)
Gene ID: HRGMv2_4309_17_39
Type: CAZyme
Location: 36583 - 38037 (+)
Gene ID: HRGMv2_4309_17_40
Type: TC
Location: 38272 - 39210 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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