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Cluster: HRGMv2_4309_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4309_13 HRGMv2_4309_13_45 37271 39214 + GH120
TF HRGMv2_4309_13 HRGMv2_4309_13_46 39649 40650 - LacI
pfam HRGMv2_4309_13 HRGMv2_4309_13_47 40787 42313 - Apiosidase | DUF5060 | DUF5605
TC HRGMv2_4309_13 HRGMv2_4309_13_48 42372 43211 - 3.A.1.1.7
TC HRGMv2_4309_13 HRGMv2_4309_13_49 43225 44097 - 3.A.1.1.28
Gene ID: HRGMv2_4309_13_45
Type: CAZyme
Location: 37271 - 39214 (+)
Gene ID: HRGMv2_4309_13_46
Type: TF
Location: 39649 - 40650 (-)
Gene ID: HRGMv2_4309_13_47
Type: pfam
Location: 40787 - 42313 (-)
Gene ID: HRGMv2_4309_13_48
Type: TC
Location: 42372 - 43211 (-)
Gene ID: HRGMv2_4309_13_49
Type: TC
Location: 43225 - 44097 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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