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Cluster: HRGMv2_4309_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4309_12 HRGMv2_4309_12_40 42251 43171 - GT2
pfam HRGMv2_4309_12 HRGMv2_4309_12_41 43247 44830 - LytR_cpsA_psr
TC HRGMv2_4309_12 HRGMv2_4309_12_42 44852 46255 - 9.B.18.1.1
CAZyme HRGMv2_4309_12 HRGMv2_4309_12_43 46372 47328 - GT2
CAZyme HRGMv2_4309_12 HRGMv2_4309_12_44 47338 49197 - GT2 | GT2
Gene ID: HRGMv2_4309_12_40
Type: CAZyme
Location: 42251 - 43171 (-)
Gene ID: HRGMv2_4309_12_41
Type: pfam
Location: 43247 - 44830 (-)
Gene ID: HRGMv2_4309_12_42
Type: TC
Location: 44852 - 46255 (-)
Gene ID: HRGMv2_4309_12_43
Type: CAZyme
Location: 46372 - 47328 (-)
Gene ID: HRGMv2_4309_12_44
Type: CAZyme
Location: 47338 - 49197 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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