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Cluster: HRGMv2_4309_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4309_11 HRGMv2_4309_11_2 1787 3283 + 3.A.1.2.20
TC HRGMv2_4309_11 HRGMv2_4309_11_3 3296 4231 + 3.A.1.2.4
STP HRGMv2_4309_11 HRGMv2_4309_11_4 4265 5377 + Peripla_BP_1
pfam HRGMv2_4309_11 HRGMv2_4309_11_5 5398 6369 + BPD_transp_2
CAZyme HRGMv2_4309_11 HRGMv2_4309_11_6 6426 9470 + GH106
TC HRGMv2_4309_11 HRGMv2_4309_11_7 9538 11175 - 4.C.1.1.4
TC HRGMv2_4309_11 HRGMv2_4309_11_8 11385 12923 + 2.A.21.2.2
Gene ID: HRGMv2_4309_11_2
Type: TC
Location: 1787 - 3283 (+)
Gene ID: HRGMv2_4309_11_3
Type: TC
Location: 3296 - 4231 (+)
Gene ID: HRGMv2_4309_11_4
Type: STP
Location: 4265 - 5377 (+)
Gene ID: HRGMv2_4309_11_5
Type: pfam
Location: 5398 - 6369 (+)
Gene ID: HRGMv2_4309_11_6
Type: CAZyme
Location: 6426 - 9470 (+)
Gene ID: HRGMv2_4309_11_7
Type: TC
Location: 9538 - 11175 (-)
Gene ID: HRGMv2_4309_11_8
Type: TC
Location: 11385 - 12923 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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