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Cluster: HRGMv2_4309_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4309_1 HRGMv2_4309_1_36 55122 57191 - GH151
STP HRGMv2_4309_1 HRGMv2_4309_1_37 57530 58696 + Aminotran_1_2
STP HRGMv2_4309_1 HRGMv2_4309_1_38 58731 60071 + SBP_bac_1
TC HRGMv2_4309_1 HRGMv2_4309_1_39 60214 61122 + 3.A.1.1.41
TC HRGMv2_4309_1 HRGMv2_4309_1_40 61155 61964 + 3.A.1.1.46
Gene ID: HRGMv2_4309_1_36
Type: CAZyme
Location: 55122 - 57191 (-)
Gene ID: HRGMv2_4309_1_37
Type: STP
Location: 57530 - 58696 (+)
Gene ID: HRGMv2_4309_1_38
Type: STP
Location: 58731 - 60071 (+)
Gene ID: HRGMv2_4309_1_39
Type: TC
Location: 60214 - 61122 (+)
Gene ID: HRGMv2_4309_1_40
Type: TC
Location: 61155 - 61964 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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