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Cluster: HRGMv2_4309_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4309_10 HRGMv2_4309_10_10 9446 11125 + GH13_31
pfam HRGMv2_4309_10 HRGMv2_4309_10_11 11236 12288 + Y_phosphatase3
TC HRGMv2_4309_10 HRGMv2_4309_10_12 12392 13978 + 3.A.1.5.28
TC HRGMv2_4309_10 HRGMv2_4309_10_13 13986 14978 + 3.A.1.5.20
TC HRGMv2_4309_10 HRGMv2_4309_10_14 14975 15796 + 3.A.1.5.2
TC HRGMv2_4309_10 HRGMv2_4309_10_15 15808 16803 + 3.A.1.5.27
TC HRGMv2_4309_10 HRGMv2_4309_10_16 16800 17396 + 3.A.1.5.3
Gene ID: HRGMv2_4309_10_10
Type: CAZyme
Location: 9446 - 11125 (+)
Gene ID: HRGMv2_4309_10_11
Type: pfam
Location: 11236 - 12288 (+)
Gene ID: HRGMv2_4309_10_12
Type: TC
Location: 12392 - 13978 (+)
Gene ID: HRGMv2_4309_10_13
Type: TC
Location: 13986 - 14978 (+)
Gene ID: HRGMv2_4309_10_14
Type: TC
Location: 14975 - 15796 (+)
Gene ID: HRGMv2_4309_10_15
Type: TC
Location: 15808 - 16803 (+)
Gene ID: HRGMv2_4309_10_16
Type: TC
Location: 16800 - 17396 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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