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Cluster: HRGMv2_4309_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4309_6 HRGMv2_4309_6_63 61609 63078 - GH77
TF HRGMv2_4309_6 HRGMv2_4309_6_64 63143 64177 - LacI
pfam HRGMv2_4309_6 HRGMv2_4309_6_65 64445 64753 + Thioredoxin | Thioredoxin_9
CAZyme HRGMv2_4309_6 HRGMv2_4309_6_66 64831 66315 - GH32
STP HRGMv2_4309_6 HRGMv2_4309_6_67 66318 68021 - SBP_bac_1
TC HRGMv2_4309_6 HRGMv2_4309_6_68 68037 68933 - 3.A.1.1.29
TC HRGMv2_4309_6 HRGMv2_4309_6_69 68949 69887 - 3.A.1.1.10
Gene ID: HRGMv2_4309_6_63
Type: CAZyme
Location: 61609 - 63078 (-)
Gene ID: HRGMv2_4309_6_64
Type: TF
Location: 63143 - 64177 (-)
Gene ID: HRGMv2_4309_6_65
Type: pfam
Location: 64445 - 64753 (+)
Gene ID: HRGMv2_4309_6_66
Type: CAZyme
Location: 64831 - 66315 (-)
Gene ID: HRGMv2_4309_6_67
Type: STP
Location: 66318 - 68021 (-)
Gene ID: HRGMv2_4309_6_68
Type: TC
Location: 68037 - 68933 (-)
Gene ID: HRGMv2_4309_6_69
Type: TC
Location: 68949 - 69887 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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