Cluster: HRGMv2_4307_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_4307
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4307_34 | HRGMv2_4307_34_1 | 84 | 2069 | - | 2.A.66.1.13 |
| TF | HRGMv2_4307_34 | HRGMv2_4307_34_2 | 2127 | 2573 | - | MarR |
| pfam | HRGMv2_4307_34 | HRGMv2_4307_34_3 | 2790 | 3692 | - | ROK |
| CAZyme | HRGMv2_4307_34 | HRGMv2_4307_34_4 | 3766 | 5190 | - | GH1 |
| TC | HRGMv2_4307_34 | HRGMv2_4307_34_5 | 5218 | 6528 | - | 4.A.3.2.2 |
| TC | HRGMv2_4307_34 | HRGMv2_4307_34_6 | 6560 | 6865 | - | 4.A.3.2.8 |
| TC | HRGMv2_4307_34 | HRGMv2_4307_34_7 | 6868 | 7209 | - | 4.A.3.2.2 |
Gene ID: HRGMv2_4307_34_1
Type: TC
Location: 84 - 2069 (-)
Type: TC
Location: 84 - 2069 (-)
Gene ID: HRGMv2_4307_34_2
Type: TF
Location: 2127 - 2573 (-)
Type: TF
Location: 2127 - 2573 (-)
Gene ID: HRGMv2_4307_34_3
Type: pfam
Location: 2790 - 3692 (-)
Type: pfam
Location: 2790 - 3692 (-)
Gene ID: HRGMv2_4307_34_4
Type: CAZyme
Location: 3766 - 5190 (-)
Type: CAZyme
Location: 3766 - 5190 (-)
Gene ID: HRGMv2_4307_34_5
Type: TC
Location: 5218 - 6528 (-)
Type: TC
Location: 5218 - 6528 (-)
Gene ID: HRGMv2_4307_34_6
Type: TC
Location: 6560 - 6865 (-)
Type: TC
Location: 6560 - 6865 (-)
Gene ID: HRGMv2_4307_34_7
Type: TC
Location: 6868 - 7209 (-)
Type: TC
Location: 6868 - 7209 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Fimicola
Species
Fimicola sp019415525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.