Cluster: HRGMv2_4307_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4307
- CGC Family ID: CGCFAM_06033
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4307_26 | HRGMv2_4307_26_6 | 3940 | 4797 | - | 3.A.1.1.28 |
| TC | HRGMv2_4307_26 | HRGMv2_4307_26_7 | 4797 | 5660 | - | 3.A.1.1.20 |
| STP | HRGMv2_4307_26 | HRGMv2_4307_26_8 | 5675 | 6946 | - | SBP_bac_1 |
| TC | HRGMv2_4307_26 | HRGMv2_4307_26_9 | 6977 | 8089 | - | 3.A.1.1.22 |
| CAZyme | HRGMv2_4307_26 | HRGMv2_4307_26_10 | 8131 | 9810 | - | GH13_31 |
Gene ID: HRGMv2_4307_26_6
Type: TC
Location: 3940 - 4797 (-)
Type: TC
Location: 3940 - 4797 (-)
Gene ID: HRGMv2_4307_26_7
Type: TC
Location: 4797 - 5660 (-)
Type: TC
Location: 4797 - 5660 (-)
Gene ID: HRGMv2_4307_26_8
Type: STP
Location: 5675 - 6946 (-)
Type: STP
Location: 5675 - 6946 (-)
Gene ID: HRGMv2_4307_26_9
Type: TC
Location: 6977 - 8089 (-)
Type: TC
Location: 6977 - 8089 (-)
Gene ID: HRGMv2_4307_26_10
Type: CAZyme
Location: 8131 - 9810 (-)
Type: CAZyme
Location: 8131 - 9810 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Fimicola
Species
Fimicola sp019415525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.