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Cluster: HRGMv2_4307_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4307_20 HRGMv2_4307_20_37 42618 44030 + 9.B.67.1.1
CAZyme HRGMv2_4307_20 HRGMv2_4307_20_38 44035 45141 + GT4
pfam HRGMv2_4307_20 HRGMv2_4307_20_39 45155 45619 + DUF4330
pfam HRGMv2_4307_20 HRGMv2_4307_20_40 45634 46131 + DUF4330
CAZyme HRGMv2_4307_20 HRGMv2_4307_20_41 46149 48389 + GT4
CAZyme HRGMv2_4307_20 HRGMv2_4307_20_42 48406 49128 + GT26
TC HRGMv2_4307_20 HRGMv2_4307_20_43 49154 50023 + 2.A.115.1.2
TF HRGMv2_4307_20 HRGMv2_4307_20_44 50354 51445 + 0037176
TC HRGMv2_4307_20 HRGMv2_4307_20_45 51536 52222 + 3.A.1.140.1
TC HRGMv2_4307_20 HRGMv2_4307_20_46 52212 53111 + 3.A.1.140.1
STP HRGMv2_4307_20 HRGMv2_4307_20_47 53134 54330 + Peptidase_M23
TC HRGMv2_4307_20 HRGMv2_4307_20_48 54461 55645 + 9.B.174.1.1
TC HRGMv2_4307_20 HRGMv2_4307_20_49 55845 56921 + 9.B.157.1.2
sulfatase HRGMv2_4307_20 HRGMv2_4307_20_50 57220 58401 + S1_2
TC HRGMv2_4307_20 HRGMv2_4307_20_51 58505 60748 + 3.A.7.16.1
TC HRGMv2_4307_20 HRGMv2_4307_20_52 60748 61464 + 3.A.11.1.4
TC HRGMv2_4307_20 HRGMv2_4307_20_53 61562 62545 + 3.A.1.132.1
TC HRGMv2_4307_20 HRGMv2_4307_20_54 62545 63408 + 3.A.1.132.1
pfam HRGMv2_4307_20 HRGMv2_4307_20_55 63424 64845 + ABC_transp_aux | DUF7088
pfam HRGMv2_4307_20 HRGMv2_4307_20_56 64884 65507 - Mntp
TC HRGMv2_4307_20 HRGMv2_4307_20_57 65613 68240 + 3.A.3.2.21
Gene ID: HRGMv2_4307_20_37
Type: TC
Location: 42618 - 44030 (+)
Gene ID: HRGMv2_4307_20_38
Type: CAZyme
Location: 44035 - 45141 (+)
Gene ID: HRGMv2_4307_20_39
Type: pfam
Location: 45155 - 45619 (+)
Gene ID: HRGMv2_4307_20_40
Type: pfam
Location: 45634 - 46131 (+)
Gene ID: HRGMv2_4307_20_41
Type: CAZyme
Location: 46149 - 48389 (+)
Gene ID: HRGMv2_4307_20_42
Type: CAZyme
Location: 48406 - 49128 (+)
Gene ID: HRGMv2_4307_20_43
Type: TC
Location: 49154 - 50023 (+)
Gene ID: HRGMv2_4307_20_44
Type: TF
Location: 50354 - 51445 (+)
Gene ID: HRGMv2_4307_20_45
Type: TC
Location: 51536 - 52222 (+)
Gene ID: HRGMv2_4307_20_46
Type: TC
Location: 52212 - 53111 (+)
Gene ID: HRGMv2_4307_20_47
Type: STP
Location: 53134 - 54330 (+)
Gene ID: HRGMv2_4307_20_48
Type: TC
Location: 54461 - 55645 (+)
Gene ID: HRGMv2_4307_20_49
Type: TC
Location: 55845 - 56921 (+)
Gene ID: HRGMv2_4307_20_50
Type: sulfatase
Location: 57220 - 58401 (+)
Gene ID: HRGMv2_4307_20_51
Type: TC
Location: 58505 - 60748 (+)
Gene ID: HRGMv2_4307_20_52
Type: TC
Location: 60748 - 61464 (+)
Gene ID: HRGMv2_4307_20_53
Type: TC
Location: 61562 - 62545 (+)
Gene ID: HRGMv2_4307_20_54
Type: TC
Location: 62545 - 63408 (+)
Gene ID: HRGMv2_4307_20_55
Type: pfam
Location: 63424 - 64845 (+)
Gene ID: HRGMv2_4307_20_56
Type: pfam
Location: 64884 - 65507 (-)
Gene ID: HRGMv2_4307_20_57
Type: TC
Location: 65613 - 68240 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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