Cluster: HRGMv2_4307_CGC26
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4307
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4307_86 | HRGMv2_4307_86_92 | 93460 | 94485 | + | CE4 |
| TF | HRGMv2_4307_86 | HRGMv2_4307_86_93 | 94557 | 95075 | + | HTH_11 |
| TC | HRGMv2_4307_86 | HRGMv2_4307_86_94 | 95143 | 96219 | + | 9.A.23.1.1 |
| pfam | HRGMv2_4307_86 | HRGMv2_4307_86_95 | 96364 | 97515 | + | LysM |
| pfam | HRGMv2_4307_86 | HRGMv2_4307_86_96 | 97733 | 98506 | + | S6PP | Hydrolase_3 |
| TC | HRGMv2_4307_86 | HRGMv2_4307_86_97 | 98544 | 99011 | - | 9.A.24.1.7 |
| pfam | HRGMv2_4307_86 | HRGMv2_4307_86_98 | 99062 | 99682 | - | Prenyltransf | Prenyltransf |
| TC | HRGMv2_4307_86 | HRGMv2_4307_86_99 | 99726 | 101033 | - | 2.A.35.1.5 |
| pfam | HRGMv2_4307_86 | HRGMv2_4307_86_100 | 101271 | 102584 | - | MatE | MatE |
| peptidase | HRGMv2_4307_86 | HRGMv2_4307_86_101 | 102603 | 104408 | - | M03.UPB |
| CAZyme | HRGMv2_4307_86 | HRGMv2_4307_86_102 | 104604 | 106037 | + | GT5 |
| TC | HRGMv2_4307_86 | HRGMv2_4307_86_103 | 106095 | 107123 | + | 2.A.120.1.7 |
Gene ID: HRGMv2_4307_86_92
Type: CAZyme
Location: 93460 - 94485 (+)
Type: CAZyme
Location: 93460 - 94485 (+)
Gene ID: HRGMv2_4307_86_93
Type: TF
Location: 94557 - 95075 (+)
Type: TF
Location: 94557 - 95075 (+)
Gene ID: HRGMv2_4307_86_94
Type: TC
Location: 95143 - 96219 (+)
Type: TC
Location: 95143 - 96219 (+)
Gene ID: HRGMv2_4307_86_95
Type: pfam
Location: 96364 - 97515 (+)
Type: pfam
Location: 96364 - 97515 (+)
Gene ID: HRGMv2_4307_86_96
Type: pfam
Location: 97733 - 98506 (+)
Type: pfam
Location: 97733 - 98506 (+)
Gene ID: HRGMv2_4307_86_97
Type: TC
Location: 98544 - 99011 (-)
Type: TC
Location: 98544 - 99011 (-)
Gene ID: HRGMv2_4307_86_98
Type: pfam
Location: 99062 - 99682 (-)
Type: pfam
Location: 99062 - 99682 (-)
Gene ID: HRGMv2_4307_86_99
Type: TC
Location: 99726 - 101033 (-)
Type: TC
Location: 99726 - 101033 (-)
Gene ID: HRGMv2_4307_86_100
Type: pfam
Location: 101271 - 102584 (-)
Type: pfam
Location: 101271 - 102584 (-)
Gene ID: HRGMv2_4307_86_101
Type: peptidase
Location: 102603 - 104408 (-)
Type: peptidase
Location: 102603 - 104408 (-)
Gene ID: HRGMv2_4307_86_102
Type: CAZyme
Location: 104604 - 106037 (+)
Type: CAZyme
Location: 104604 - 106037 (+)
Gene ID: HRGMv2_4307_86_103
Type: TC
Location: 106095 - 107123 (+)
Type: TC
Location: 106095 - 107123 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Fimicola
Species
Fimicola sp019415525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.