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Cluster: HRGMv2_4307_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4307_83 HRGMv2_4307_83_39 39831 40616 + CE4
pfam HRGMv2_4307_83 HRGMv2_4307_83_40 40786 41364 - DUF1836
TC HRGMv2_4307_83 HRGMv2_4307_83_41 41547 42203 + 1.C.113.1.2
pfam HRGMv2_4307_83 HRGMv2_4307_83_42 42538 44949 + tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2
TC HRGMv2_4307_83 HRGMv2_4307_83_43 45198 46406 + 2.A.23.1.5
TC HRGMv2_4307_83 HRGMv2_4307_83_44 46499 47245 + 9.B.158.1.3
pfam HRGMv2_4307_83 HRGMv2_4307_83_45 47247 48395 + tRNA-synt_2c | DHHA1 | tRNA_SAD
TC HRGMv2_4307_83 HRGMv2_4307_83_46 48430 48987 - 3.A.1.26.10
pfam HRGMv2_4307_83 HRGMv2_4307_83_47 49582 50748 + AlaDh_PNT_C | Shikimate_DH | 2-Hacid_dh_C | NAD_binding_2 | AlaDh_PNT_N
TC HRGMv2_4307_83 HRGMv2_4307_83_48 50829 52238 + 2.A.35.2.1
pfam HRGMv2_4307_83 HRGMv2_4307_83_49 52365 53198 + S6PP | Hydrolase_3
STP HRGMv2_4307_83 HRGMv2_4307_83_50 53214 54530 + AAA
TC HRGMv2_4307_83 HRGMv2_4307_83_51 54580 55953 + 2.A.66.1.32
TC HRGMv2_4307_83 HRGMv2_4307_83_52 55974 56402 - 9.A.11.1.1
TC HRGMv2_4307_83 HRGMv2_4307_83_53 56399 57013 - 9.A.11.1.1
Gene ID: HRGMv2_4307_83_39
Type: CAZyme
Location: 39831 - 40616 (+)
Gene ID: HRGMv2_4307_83_40
Type: pfam
Location: 40786 - 41364 (-)
Gene ID: HRGMv2_4307_83_41
Type: TC
Location: 41547 - 42203 (+)
Gene ID: HRGMv2_4307_83_42
Type: pfam
Location: 42538 - 44949 (+)
Gene ID: HRGMv2_4307_83_43
Type: TC
Location: 45198 - 46406 (+)
Gene ID: HRGMv2_4307_83_44
Type: TC
Location: 46499 - 47245 (+)
Gene ID: HRGMv2_4307_83_45
Type: pfam
Location: 47247 - 48395 (+)
Gene ID: HRGMv2_4307_83_46
Type: TC
Location: 48430 - 48987 (-)
Gene ID: HRGMv2_4307_83_47
Type: pfam
Location: 49582 - 50748 (+)
Gene ID: HRGMv2_4307_83_48
Type: TC
Location: 50829 - 52238 (+)
Gene ID: HRGMv2_4307_83_49
Type: pfam
Location: 52365 - 53198 (+)
Gene ID: HRGMv2_4307_83_50
Type: STP
Location: 53214 - 54530 (+)
Gene ID: HRGMv2_4307_83_51
Type: TC
Location: 54580 - 55953 (+)
Gene ID: HRGMv2_4307_83_52
Type: TC
Location: 55974 - 56402 (-)
Gene ID: HRGMv2_4307_83_53
Type: TC
Location: 56399 - 57013 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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