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Cluster: HRGMv2_4307_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4307_74 HRGMv2_4307_74_3 1089 3845 + GT51
NULL(UNKNOWN) HRGMv2_4307_74 HRGMv2_4307_74_4 3884 4351 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4307_74 HRGMv2_4307_74_5 4447 5925 - SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C
TC HRGMv2_4307_74 HRGMv2_4307_74_6 6075 6995 + 2.A.7.3.28
NULL(UNKNOWN) HRGMv2_4307_74 HRGMv2_4307_74_7 7010 7150 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4307_74 HRGMv2_4307_74_8 7179 9947 - 3.A.3.4.1
TF HRGMv2_4307_74 HRGMv2_4307_74_9 10206 10703 - Trans_reg_C
TC HRGMv2_4307_74 HRGMv2_4307_74_10 10717 13383 - 3.A.3.4.1
TC HRGMv2_4307_74 HRGMv2_4307_74_11 13511 16114 - 3.A.3.2.21
Gene ID: HRGMv2_4307_74_3
Type: CAZyme
Location: 1089 - 3845 (+)
Gene ID: HRGMv2_4307_74_4
Type:
Location: 3884 - 4351 (-)
Gene ID: HRGMv2_4307_74_5
Type: pfam
Location: 4447 - 5925 (-)
Gene ID: HRGMv2_4307_74_6
Type: TC
Location: 6075 - 6995 (+)
Gene ID: HRGMv2_4307_74_7
Type:
Location: 7010 - 7150 (-)
Gene ID: HRGMv2_4307_74_8
Type: TC
Location: 7179 - 9947 (-)
Gene ID: HRGMv2_4307_74_9
Type: TF
Location: 10206 - 10703 (-)
Gene ID: HRGMv2_4307_74_10
Type: TC
Location: 10717 - 13383 (-)
Gene ID: HRGMv2_4307_74_11
Type: TC
Location: 13511 - 16114 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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