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Cluster: HRGMv2_4307_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4307_67 HRGMv2_4307_67_250 232513 233886 + 3.D.6.1.2
TC HRGMv2_4307_67 HRGMv2_4307_67_251 233902 234849 + 3.D.6.1.2
TC HRGMv2_4307_67 HRGMv2_4307_67_252 234846 235406 + 3.D.6.1.3
TC HRGMv2_4307_67 HRGMv2_4307_67_253 235406 236008 + 3.D.6.1.2
TC HRGMv2_4307_67 HRGMv2_4307_67_254 236026 236604 + 3.D.6.1.2
TC HRGMv2_4307_67 HRGMv2_4307_67_255 236626 237498 + 3.D.6.1.2
pfam HRGMv2_4307_67 HRGMv2_4307_67_256 237637 237894 + DUF4321
pfam HRGMv2_4307_67 HRGMv2_4307_67_257 237907 238524 + Maf
CAZyme HRGMv2_4307_67 HRGMv2_4307_67_258 238748 244342 + CBM54
pfam HRGMv2_4307_67 HRGMv2_4307_67_259 244384 245163 - PRD | PRD | CAT_RBD
TC HRGMv2_4307_67 HRGMv2_4307_67_260 245310 247472 - 4.A.1.1.9
pfam HRGMv2_4307_67 HRGMv2_4307_67_261 247738 249459 - MCRA
TC HRGMv2_4307_67 HRGMv2_4307_67_262 249605 250642 - 3.A.1.2.3
STP HRGMv2_4307_67 HRGMv2_4307_67_263 250654 251619 - Peripla_BP_1
TC HRGMv2_4307_67 HRGMv2_4307_67_264 251619 253427 - 8.A.59.2.1
TF HRGMv2_4307_67 HRGMv2_4307_67_265 253442 255058 - HTH_AraC | HTH_AraC
TC HRGMv2_4307_67 HRGMv2_4307_67_266 255213 256070 - 9.B.126.2.7
TC HRGMv2_4307_67 HRGMv2_4307_67_267 256343 257692 + 2.A.25.1.3
Gene ID: HRGMv2_4307_67_250
Type: TC
Location: 232513 - 233886 (+)
Gene ID: HRGMv2_4307_67_251
Type: TC
Location: 233902 - 234849 (+)
Gene ID: HRGMv2_4307_67_252
Type: TC
Location: 234846 - 235406 (+)
Gene ID: HRGMv2_4307_67_253
Type: TC
Location: 235406 - 236008 (+)
Gene ID: HRGMv2_4307_67_254
Type: TC
Location: 236026 - 236604 (+)
Gene ID: HRGMv2_4307_67_255
Type: TC
Location: 236626 - 237498 (+)
Gene ID: HRGMv2_4307_67_256
Type: pfam
Location: 237637 - 237894 (+)
Gene ID: HRGMv2_4307_67_257
Type: pfam
Location: 237907 - 238524 (+)
Gene ID: HRGMv2_4307_67_258
Type: CAZyme
Location: 238748 - 244342 (+)
Gene ID: HRGMv2_4307_67_259
Type: pfam
Location: 244384 - 245163 (-)
Gene ID: HRGMv2_4307_67_260
Type: TC
Location: 245310 - 247472 (-)
Gene ID: HRGMv2_4307_67_261
Type: pfam
Location: 247738 - 249459 (-)
Gene ID: HRGMv2_4307_67_262
Type: TC
Location: 249605 - 250642 (-)
Gene ID: HRGMv2_4307_67_263
Type: STP
Location: 250654 - 251619 (-)
Gene ID: HRGMv2_4307_67_264
Type: TC
Location: 251619 - 253427 (-)
Gene ID: HRGMv2_4307_67_265
Type: TF
Location: 253442 - 255058 (-)
Gene ID: HRGMv2_4307_67_266
Type: TC
Location: 255213 - 256070 (-)
Gene ID: HRGMv2_4307_67_267
Type: TC
Location: 256343 - 257692 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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