Cluster: HRGMv2_4307_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_4307
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4307_16 | HRGMv2_4307_16_1 | 42 | 1508 | - | GH1 |
| pfam | HRGMv2_4307_16 | HRGMv2_4307_16_2 | 1539 | 2471 | - | Mem_trans |
| CAZyme | HRGMv2_4307_16 | HRGMv2_4307_16_3 | 2541 | 4019 | - | GH1 |
| TC | HRGMv2_4307_16 | HRGMv2_4307_16_4 | 4171 | 5469 | - | 4.A.3.2.9 |
| TC | HRGMv2_4307_16 | HRGMv2_4307_16_5 | 5469 | 5786 | - | 4.A.3.2.2 |
| TC | HRGMv2_4307_16 | HRGMv2_4307_16_6 | 5783 | 6121 | - | 4.A.3.2.8 |
Gene ID: HRGMv2_4307_16_1
Type: CAZyme
Location: 42 - 1508 (-)
Type: CAZyme
Location: 42 - 1508 (-)
Gene ID: HRGMv2_4307_16_2
Type: pfam
Location: 1539 - 2471 (-)
Type: pfam
Location: 1539 - 2471 (-)
Gene ID: HRGMv2_4307_16_3
Type: CAZyme
Location: 2541 - 4019 (-)
Type: CAZyme
Location: 2541 - 4019 (-)
Gene ID: HRGMv2_4307_16_4
Type: TC
Location: 4171 - 5469 (-)
Type: TC
Location: 4171 - 5469 (-)
Gene ID: HRGMv2_4307_16_5
Type: TC
Location: 5469 - 5786 (-)
Type: TC
Location: 5469 - 5786 (-)
Gene ID: HRGMv2_4307_16_6
Type: TC
Location: 5783 - 6121 (-)
Type: TC
Location: 5783 - 6121 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Fimicola
Species
Fimicola sp019415525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.