Cluster: HRGMv2_4307_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4307
- CGC Family ID: CGCFAM_08167
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4307_58 | HRGMv2_4307_58_2 | 1098 | 2975 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_4307_58 | HRGMv2_4307_58_3 | 2992 | 4422 | + | GH1 |
| TC | HRGMv2_4307_58 | HRGMv2_4307_58_4 | 4757 | 5782 | + | 2.A.56.1.9 |
| pfam | HRGMv2_4307_58 | HRGMv2_4307_58_5 | 5808 | 6296 | + | DctQ |
| TC | HRGMv2_4307_58 | HRGMv2_4307_58_6 | 6300 | 7583 | + | 2.A.56.1.1 |
Gene ID: HRGMv2_4307_58_2
Type: TC
Location: 1098 - 2975 (+)
Type: TC
Location: 1098 - 2975 (+)
Gene ID: HRGMv2_4307_58_3
Type: CAZyme
Location: 2992 - 4422 (+)
Type: CAZyme
Location: 2992 - 4422 (+)
Gene ID: HRGMv2_4307_58_4
Type: TC
Location: 4757 - 5782 (+)
Type: TC
Location: 4757 - 5782 (+)
Gene ID: HRGMv2_4307_58_5
Type: pfam
Location: 5808 - 6296 (+)
Type: pfam
Location: 5808 - 6296 (+)
Gene ID: HRGMv2_4307_58_6
Type: TC
Location: 6300 - 7583 (+)
Type: TC
Location: 6300 - 7583 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Fimicola
Species
Fimicola sp019415525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.