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Cluster: HRGMv2_4307_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4307_45 HRGMv2_4307_45_5 6065 7678 + 3.A.1.5.33
TC HRGMv2_4307_45 HRGMv2_4307_45_6 7747 8685 + 3.A.1.5.3
TC HRGMv2_4307_45 HRGMv2_4307_45_7 8690 9514 + 3.A.1.5.43
TC HRGMv2_4307_45 HRGMv2_4307_45_8 9511 10332 + 3.A.1.5.33
TC HRGMv2_4307_45 HRGMv2_4307_45_9 10325 11101 + 3.A.1.5.43
pfam HRGMv2_4307_45 HRGMv2_4307_45_10 11114 12046 + AstE_AspA_cat
pfam HRGMv2_4307_45 HRGMv2_4307_45_11 12015 13352 + MatE | MatE
TC HRGMv2_4307_45 HRGMv2_4307_45_12 13603 14118 + 4.A.1.2.11
CAZyme HRGMv2_4307_45 HRGMv2_4307_45_13 14131 15549 + GH32
STP HRGMv2_4307_45 HRGMv2_4307_45_14 15576 16541 + PfkB
TF HRGMv2_4307_45 HRGMv2_4307_45_15 16718 17695 + LacI
TC HRGMv2_4307_45 HRGMv2_4307_45_16 17816 19195 + 4.A.1.2.1
CAZyme HRGMv2_4307_45 HRGMv2_4307_45_17 19192 20622 + GH32
TC HRGMv2_4307_45 HRGMv2_4307_45_18 21211 22761 - 2.A.15.1.11
Gene ID: HRGMv2_4307_45_5
Type: TC
Location: 6065 - 7678 (+)
Gene ID: HRGMv2_4307_45_6
Type: TC
Location: 7747 - 8685 (+)
Gene ID: HRGMv2_4307_45_7
Type: TC
Location: 8690 - 9514 (+)
Gene ID: HRGMv2_4307_45_8
Type: TC
Location: 9511 - 10332 (+)
Gene ID: HRGMv2_4307_45_9
Type: TC
Location: 10325 - 11101 (+)
Gene ID: HRGMv2_4307_45_10
Type: pfam
Location: 11114 - 12046 (+)
Gene ID: HRGMv2_4307_45_11
Type: pfam
Location: 12015 - 13352 (+)
Gene ID: HRGMv2_4307_45_12
Type: TC
Location: 13603 - 14118 (+)
Gene ID: HRGMv2_4307_45_13
Type: CAZyme
Location: 14131 - 15549 (+)
Gene ID: HRGMv2_4307_45_14
Type: STP
Location: 15576 - 16541 (+)
Gene ID: HRGMv2_4307_45_15
Type: TF
Location: 16718 - 17695 (+)
Gene ID: HRGMv2_4307_45_16
Type: TC
Location: 17816 - 19195 (+)
Gene ID: HRGMv2_4307_45_17
Type: CAZyme
Location: 19192 - 20622 (+)
Gene ID: HRGMv2_4307_45_18
Type: TC
Location: 21211 - 22761 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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