Cluster: HRGMv2_4307_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4307
- CGC Family ID: CGCFAM_00264
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4307_41 | HRGMv2_4307_41_4 | 2617 | 3846 | + | 4.A.3.2.3 |
| NULL(UNKNOWN) | HRGMv2_4307_41 | HRGMv2_4307_41_5 | 3836 | 4501 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4307_41 | HRGMv2_4307_41_6 | 4482 | 4829 | + | PTS_IIA |
| CAZyme | HRGMv2_4307_41 | HRGMv2_4307_41_7 | 4848 | 6305 | + | GH1 |
Gene ID: HRGMv2_4307_41_4
Type: TC
Location: 2617 - 3846 (+)
Type: TC
Location: 2617 - 3846 (+)
Gene ID: HRGMv2_4307_41_5
Type:
Location: 3836 - 4501 (+)
Type:
Location: 3836 - 4501 (+)
Gene ID: HRGMv2_4307_41_6
Type: pfam
Location: 4482 - 4829 (+)
Type: pfam
Location: 4482 - 4829 (+)
Gene ID: HRGMv2_4307_41_7
Type: CAZyme
Location: 4848 - 6305 (+)
Type: CAZyme
Location: 4848 - 6305 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Fimicola
Species
Fimicola sp019415525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.