Cluster: HRGMv2_4307_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4307
- CGC Family ID: CGCFAM_01781
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4307_40 | HRGMv2_4307_40_13 | 21546 | 22661 | + | 2.A.86.1.8 |
| TF | HRGMv2_4307_40 | HRGMv2_4307_40_14 | 22706 | 23719 | + | LacI |
| CAZyme | HRGMv2_4307_40 | HRGMv2_4307_40_15 | 24143 | 26077 | + | GH42 |
| CAZyme | HRGMv2_4307_40 | HRGMv2_4307_40_16 | 26109 | 28172 | + | GH36 |
| TC | HRGMv2_4307_40 | HRGMv2_4307_40_17 | 28442 | 29827 | + | 2.A.2.1.1 |
| NULL(UNKNOWN) | HRGMv2_4307_40 | HRGMv2_4307_40_18 | 29918 | 30049 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4307_40 | HRGMv2_4307_40_19 | 30062 | 30628 | + | 1.A.8.2.1 |
Gene ID: HRGMv2_4307_40_13
Type: TC
Location: 21546 - 22661 (+)
Type: TC
Location: 21546 - 22661 (+)
Gene ID: HRGMv2_4307_40_14
Type: TF
Location: 22706 - 23719 (+)
Type: TF
Location: 22706 - 23719 (+)
Gene ID: HRGMv2_4307_40_15
Type: CAZyme
Location: 24143 - 26077 (+)
Type: CAZyme
Location: 24143 - 26077 (+)
Gene ID: HRGMv2_4307_40_16
Type: CAZyme
Location: 26109 - 28172 (+)
Type: CAZyme
Location: 26109 - 28172 (+)
Gene ID: HRGMv2_4307_40_17
Type: TC
Location: 28442 - 29827 (+)
Type: TC
Location: 28442 - 29827 (+)
Gene ID: HRGMv2_4307_40_18
Type:
Location: 29918 - 30049 (+)
Type:
Location: 29918 - 30049 (+)
Gene ID: HRGMv2_4307_40_19
Type: TC
Location: 30062 - 30628 (+)
Type: TC
Location: 30062 - 30628 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Fimicola
Species
Fimicola sp019415525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.