Cluster: HRGMv2_4307_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4307
- CGC Family ID: CGCFAM_04041
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4307_2 | HRGMv2_4307_2_23 | 24178 | 25542 | - | GT4 |
| pfam | HRGMv2_4307_2 | HRGMv2_4307_2_24 | 25722 | 27572 | + | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 |
| NULL(UNKNOWN) | HRGMv2_4307_2 | HRGMv2_4307_2_25 | 27743 | 30268 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4307_2 | HRGMv2_4307_2_26 | 30268 | 31200 | + | 3.A.1.105.9 |
| TC | HRGMv2_4307_2 | HRGMv2_4307_2_27 | 31190 | 32047 | + | 3.A.1.132.7 |
Gene ID: HRGMv2_4307_2_23
Type: CAZyme
Location: 24178 - 25542 (-)
Type: CAZyme
Location: 24178 - 25542 (-)
Gene ID: HRGMv2_4307_2_24
Type: pfam
Location: 25722 - 27572 (+)
Type: pfam
Location: 25722 - 27572 (+)
Gene ID: HRGMv2_4307_2_25
Type:
Location: 27743 - 30268 (+)
Type:
Location: 27743 - 30268 (+)
Gene ID: HRGMv2_4307_2_26
Type: TC
Location: 30268 - 31200 (+)
Type: TC
Location: 30268 - 31200 (+)
Gene ID: HRGMv2_4307_2_27
Type: TC
Location: 31190 - 32047 (+)
Type: TC
Location: 31190 - 32047 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Fimicola
Species
Fimicola sp019415525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.