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Cluster: HRGMv2_4306_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4306_7 HRGMv2_4306_7_54 66812 68209 + 2.A.66.1.32
NULL(UNKNOWN) HRGMv2_4306_7 HRGMv2_4306_7_55 68321 68455 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4306_7 HRGMv2_4306_7_56 68625 70043 + 3.A.23.1.1
peptidase HRGMv2_4306_7 HRGMv2_4306_7_57 70926 72299 + M38.UPW
pfam HRGMv2_4306_7 HRGMv2_4306_7_58 72318 72809 + DUF1097
TC HRGMv2_4306_7 HRGMv2_4306_7_59 73140 74468 - 2.A.66.1.28
TC HRGMv2_4306_7 HRGMv2_4306_7_60 74641 75660 - 2.A.85.5.1
pfam HRGMv2_4306_7 HRGMv2_4306_7_61 76348 77016 + Resolvase
pfam HRGMv2_4306_7 HRGMv2_4306_7_62 77216 78115 - Lactamase_B
CAZyme HRGMv2_4306_7 HRGMv2_4306_7_63 78757 80037 + GT2
pfam HRGMv2_4306_7 HRGMv2_4306_7_64 80452 81177 - Acyltransferase
pfam HRGMv2_4306_7 HRGMv2_4306_7_65 81796 83301 + Resolvase | Recombinase | Zn_ribbon_recom
TC HRGMv2_4306_7 HRGMv2_4306_7_66 83605 84969 - 2.A.66.1.25
Gene ID: HRGMv2_4306_7_54
Type: TC
Location: 66812 - 68209 (+)
Gene ID: HRGMv2_4306_7_55
Type:
Location: 68321 - 68455 (-)
Gene ID: HRGMv2_4306_7_56
Type: TC
Location: 68625 - 70043 (+)
Gene ID: HRGMv2_4306_7_57
Type: peptidase
Location: 70926 - 72299 (+)
Gene ID: HRGMv2_4306_7_58
Type: pfam
Location: 72318 - 72809 (+)
Gene ID: HRGMv2_4306_7_59
Type: TC
Location: 73140 - 74468 (-)
Gene ID: HRGMv2_4306_7_60
Type: TC
Location: 74641 - 75660 (-)
Gene ID: HRGMv2_4306_7_61
Type: pfam
Location: 76348 - 77016 (+)
Gene ID: HRGMv2_4306_7_62
Type: pfam
Location: 77216 - 78115 (-)
Gene ID: HRGMv2_4306_7_63
Type: CAZyme
Location: 78757 - 80037 (+)
Gene ID: HRGMv2_4306_7_64
Type: pfam
Location: 80452 - 81177 (-)
Gene ID: HRGMv2_4306_7_65
Type: pfam
Location: 81796 - 83301 (+)
Gene ID: HRGMv2_4306_7_66
Type: TC
Location: 83605 - 84969 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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