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Cluster: HRGMv2_4306_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4306_9 HRGMv2_4306_9_67 99363 100517 + GH109
TF HRGMv2_4306_9 HRGMv2_4306_9_68 100578 101345 + HTH_DeoR
TC HRGMv2_4306_9 HRGMv2_4306_9_69 101317 102171 + 3.A.1.17.5
pfam HRGMv2_4306_9 HRGMv2_4306_9_70 102188 102985 + BPD_transp_1
TC HRGMv2_4306_9 HRGMv2_4306_9_71 103005 103802 + 3.A.1.16.2
pfam HRGMv2_4306_9 HRGMv2_4306_9_72 103822 104622 + BPD_transp_1
TC HRGMv2_4306_9 HRGMv2_4306_9_73 104682 105833 + 3.A.1.17.7
Gene ID: HRGMv2_4306_9_67
Type: CAZyme
Location: 99363 - 100517 (+)
Gene ID: HRGMv2_4306_9_68
Type: TF
Location: 100578 - 101345 (+)
Gene ID: HRGMv2_4306_9_69
Type: TC
Location: 101317 - 102171 (+)
Gene ID: HRGMv2_4306_9_70
Type: pfam
Location: 102188 - 102985 (+)
Gene ID: HRGMv2_4306_9_71
Type: TC
Location: 103005 - 103802 (+)
Gene ID: HRGMv2_4306_9_72
Type: pfam
Location: 103822 - 104622 (+)
Gene ID: HRGMv2_4306_9_73
Type: TC
Location: 104682 - 105833 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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