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Cluster: HRGMv2_4306_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4306_8 HRGMv2_4306_8_206 199025 199315 + CE4
peptidase HRGMv2_4306_8 HRGMv2_4306_8_207 200260 201588 + M20.UND
pfam HRGMv2_4306_8 HRGMv2_4306_8_208 201578 202855 + Bmp
TC HRGMv2_4306_8 HRGMv2_4306_8_209 202872 204422 + 3.A.1.2.12
TC HRGMv2_4306_8 HRGMv2_4306_8_210 204412 205479 + 3.A.1.2.12
TC HRGMv2_4306_8 HRGMv2_4306_8_211 205489 206394 + 3.A.1.2.18
Gene ID: HRGMv2_4306_8_206
Type: CAZyme
Location: 199025 - 199315 (+)
Gene ID: HRGMv2_4306_8_207
Type: peptidase
Location: 200260 - 201588 (+)
Gene ID: HRGMv2_4306_8_208
Type: pfam
Location: 201578 - 202855 (+)
Gene ID: HRGMv2_4306_8_209
Type: TC
Location: 202872 - 204422 (+)
Gene ID: HRGMv2_4306_8_210
Type: TC
Location: 204412 - 205479 (+)
Gene ID: HRGMv2_4306_8_211
Type: TC
Location: 205489 - 206394 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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