Cluster: HRGMv2_4304_CGC9
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_83 | 124429 | 125346 | - | GT2 |
| pfam | HRGMv2_4304_3 | HRGMv2_4304_3_84 | 125352 | 126575 | - | LytR_cpsA_psr |
| TC | HRGMv2_4304_3 | HRGMv2_4304_3_85 | 126599 | 127999 | - | 9.B.18.1.1 |
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_86 | 128246 | 129205 | - | GT2 |
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_87 | 129216 | 131039 | - | GT2 | GT2 |
| STP | HRGMv2_4304_3 | HRGMv2_4304_3_88 | 131069 | 132202 | - | Aminotran_1_2 |
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_89 | 132214 | 134013 | - | GT2 | GT2 |
| pfam | HRGMv2_4304_3 | HRGMv2_4304_3_90 | 134244 | 136919 | + | YfhO |
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_91 | 136975 | 139641 | - | GT2 |
| pfam | HRGMv2_4304_3 | HRGMv2_4304_3_92 | 139685 | 141766 | - | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 |
| TC | HRGMv2_4304_3 | HRGMv2_4304_3_93 | 141785 | 143074 | - | 3.A.1.103.6 |
| TC | HRGMv2_4304_3 | HRGMv2_4304_3_94 | 143104 | 143901 | - | 3.A.1.104.1 |
Gene ID: HRGMv2_4304_3_83
Type: CAZyme
Location: 124429 - 125346 (-)
Type: CAZyme
Location: 124429 - 125346 (-)
Gene ID: HRGMv2_4304_3_84
Type: pfam
Location: 125352 - 126575 (-)
Type: pfam
Location: 125352 - 126575 (-)
Gene ID: HRGMv2_4304_3_85
Type: TC
Location: 126599 - 127999 (-)
Type: TC
Location: 126599 - 127999 (-)
Gene ID: HRGMv2_4304_3_86
Type: CAZyme
Location: 128246 - 129205 (-)
Type: CAZyme
Location: 128246 - 129205 (-)
Gene ID: HRGMv2_4304_3_87
Type: CAZyme
Location: 129216 - 131039 (-)
Type: CAZyme
Location: 129216 - 131039 (-)
Gene ID: HRGMv2_4304_3_88
Type: STP
Location: 131069 - 132202 (-)
Type: STP
Location: 131069 - 132202 (-)
Gene ID: HRGMv2_4304_3_89
Type: CAZyme
Location: 132214 - 134013 (-)
Type: CAZyme
Location: 132214 - 134013 (-)
Gene ID: HRGMv2_4304_3_90
Type: pfam
Location: 134244 - 136919 (+)
Type: pfam
Location: 134244 - 136919 (+)
Gene ID: HRGMv2_4304_3_91
Type: CAZyme
Location: 136975 - 139641 (-)
Type: CAZyme
Location: 136975 - 139641 (-)
Gene ID: HRGMv2_4304_3_92
Type: pfam
Location: 139685 - 141766 (-)
Type: pfam
Location: 139685 - 141766 (-)
Gene ID: HRGMv2_4304_3_93
Type: TC
Location: 141785 - 143074 (-)
Type: TC
Location: 141785 - 143074 (-)
Gene ID: HRGMv2_4304_3_94
Type: TC
Location: 143104 - 143901 (-)
Type: TC
Location: 143104 - 143901 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.