Cluster: HRGMv2_4304_CGC63
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_02342
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4304_67 | HRGMv2_4304_67_7 | 9645 | 10421 | + | 1.A.16.3.3 |
| pfam | HRGMv2_4304_67 | HRGMv2_4304_67_8 | 10553 | 11668 | + | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_3 | Choline_bind_3 |
| CAZyme | HRGMv2_4304_67 | HRGMv2_4304_67_9 | 11804 | 12508 | + | GT51 |
| TF | HRGMv2_4304_67 | HRGMv2_4304_67_10 | 12788 | 13462 | + | Trans_reg_C |
| STP | HRGMv2_4304_67 | HRGMv2_4304_67_11 | 13450 | 14658 | + | HATPase_c | HisKA |
| TC | HRGMv2_4304_67 | HRGMv2_4304_67_12 | 14788 | 15666 | + | 3.A.1.148.3 |
Gene ID: HRGMv2_4304_67_7
Type: TC
Location: 9645 - 10421 (+)
Type: TC
Location: 9645 - 10421 (+)
Gene ID: HRGMv2_4304_67_8
Type: pfam
Location: 10553 - 11668 (+)
Type: pfam
Location: 10553 - 11668 (+)
Gene ID: HRGMv2_4304_67_9
Type: CAZyme
Location: 11804 - 12508 (+)
Type: CAZyme
Location: 11804 - 12508 (+)
Gene ID: HRGMv2_4304_67_10
Type: TF
Location: 12788 - 13462 (+)
Type: TF
Location: 12788 - 13462 (+)
Gene ID: HRGMv2_4304_67_11
Type: STP
Location: 13450 - 14658 (+)
Type: STP
Location: 13450 - 14658 (+)
Gene ID: HRGMv2_4304_67_12
Type: TC
Location: 14788 - 15666 (+)
Type: TC
Location: 14788 - 15666 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.