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Cluster: HRGMv2_4304_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4304_48 HRGMv2_4304_48_12 13677 15413 + 8.A.59.2.1
CAZyme HRGMv2_4304_48 HRGMv2_4304_48_13 15615 19931 + GH3
STP HRGMv2_4304_48 HRGMv2_4304_48_14 19994 20614 + SBP_bac_1
STP HRGMv2_4304_48 HRGMv2_4304_48_15 20615 21412 + SBP_bac_1
TC HRGMv2_4304_48 HRGMv2_4304_48_16 21473 22345 + 3.A.1.1.11
TC HRGMv2_4304_48 HRGMv2_4304_48_17 22368 23207 + 3.A.1.1.7
pfam HRGMv2_4304_48 HRGMv2_4304_48_18 23265 24350 + FKBP_C | Trigger_C
CAZyme HRGMv2_4304_48 HRGMv2_4304_48_19 24385 25734 + GH30_1
CAZyme HRGMv2_4304_48 HRGMv2_4304_48_20 25731 27377 + CBM91 | GH43_11
CAZyme HRGMv2_4304_48 HRGMv2_4304_48_21 27761 33913 + CBM67 | GH78
Gene ID: HRGMv2_4304_48_12
Type: TC
Location: 13677 - 15413 (+)
Gene ID: HRGMv2_4304_48_13
Type: CAZyme
Location: 15615 - 19931 (+)
Gene ID: HRGMv2_4304_48_14
Type: STP
Location: 19994 - 20614 (+)
Gene ID: HRGMv2_4304_48_15
Type: STP
Location: 20615 - 21412 (+)
Gene ID: HRGMv2_4304_48_16
Type: TC
Location: 21473 - 22345 (+)
Gene ID: HRGMv2_4304_48_17
Type: TC
Location: 22368 - 23207 (+)
Gene ID: HRGMv2_4304_48_18
Type: pfam
Location: 23265 - 24350 (+)
Gene ID: HRGMv2_4304_48_19
Type: CAZyme
Location: 24385 - 25734 (+)
Gene ID: HRGMv2_4304_48_20
Type: CAZyme
Location: 25731 - 27377 (+)
Gene ID: HRGMv2_4304_48_21
Type: CAZyme
Location: 27761 - 33913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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