Cluster: HRGMv2_4304_CGC60
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4304_45 | HRGMv2_4304_45_15 | 11775 | 12785 | - | 9.A.11.1.1 |
| CAZyme | HRGMv2_4304_45 | HRGMv2_4304_45_16 | 12954 | 13766 | + | CE4 |
| STP | HRGMv2_4304_45 | HRGMv2_4304_45_17 | 13806 | 14318 | - | Nitroreductase | Nitroreductase |
| pfam | HRGMv2_4304_45 | HRGMv2_4304_45_18 | 14351 | 15175 | - | Lactamase_B |
| TC | HRGMv2_4304_45 | HRGMv2_4304_45_19 | 15243 | 15710 | - | 9.A.11.1.1 |
| pfam | HRGMv2_4304_45 | HRGMv2_4304_45_20 | 15883 | 16296 | - | SpoVAB |
| TC | HRGMv2_4304_45 | HRGMv2_4304_45_21 | 16361 | 16987 | - | 9.A.11.1.1 |
Gene ID: HRGMv2_4304_45_15
Type: TC
Location: 11775 - 12785 (-)
Type: TC
Location: 11775 - 12785 (-)
Gene ID: HRGMv2_4304_45_16
Type: CAZyme
Location: 12954 - 13766 (+)
Type: CAZyme
Location: 12954 - 13766 (+)
Gene ID: HRGMv2_4304_45_17
Type: STP
Location: 13806 - 14318 (-)
Type: STP
Location: 13806 - 14318 (-)
Gene ID: HRGMv2_4304_45_18
Type: pfam
Location: 14351 - 15175 (-)
Type: pfam
Location: 14351 - 15175 (-)
Gene ID: HRGMv2_4304_45_19
Type: TC
Location: 15243 - 15710 (-)
Type: TC
Location: 15243 - 15710 (-)
Gene ID: HRGMv2_4304_45_20
Type: pfam
Location: 15883 - 16296 (-)
Type: pfam
Location: 15883 - 16296 (-)
Gene ID: HRGMv2_4304_45_21
Type: TC
Location: 16361 - 16987 (-)
Type: TC
Location: 16361 - 16987 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.