Cluster: HRGMv2_4304_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_06276
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4304_2 | HRGMv2_4304_2_108 | 111901 | 114327 | - | 3.A.3.23.2 |
| pfam | HRGMv2_4304_2 | HRGMv2_4304_2_109 | 114525 | 115859 | + | ELFV_dehydrog | ELFV_dehydrog_N |
| TC | HRGMv2_4304_2 | HRGMv2_4304_2_110 | 115952 | 116644 | - | 2.A.122.1.4 |
| TC | HRGMv2_4304_2 | HRGMv2_4304_2_111 | 116645 | 117007 | - | 1.E.14.1.17 |
| TF | HRGMv2_4304_2 | HRGMv2_4304_2_112 | 117029 | 117934 | - | HTH_AraC |
| pfam | HRGMv2_4304_2 | HRGMv2_4304_2_113 | 118087 | 119256 | + | MFS_1 |
| CAZyme | HRGMv2_4304_2 | HRGMv2_4304_2_114 | 119338 | 123045 | - | GH3 |
Gene ID: HRGMv2_4304_2_108
Type: TC
Location: 111901 - 114327 (-)
Type: TC
Location: 111901 - 114327 (-)
Gene ID: HRGMv2_4304_2_109
Type: pfam
Location: 114525 - 115859 (+)
Type: pfam
Location: 114525 - 115859 (+)
Gene ID: HRGMv2_4304_2_110
Type: TC
Location: 115952 - 116644 (-)
Type: TC
Location: 115952 - 116644 (-)
Gene ID: HRGMv2_4304_2_111
Type: TC
Location: 116645 - 117007 (-)
Type: TC
Location: 116645 - 117007 (-)
Gene ID: HRGMv2_4304_2_112
Type: TF
Location: 117029 - 117934 (-)
Type: TF
Location: 117029 - 117934 (-)
Gene ID: HRGMv2_4304_2_113
Type: pfam
Location: 118087 - 119256 (+)
Type: pfam
Location: 118087 - 119256 (+)
Gene ID: HRGMv2_4304_2_114
Type: CAZyme
Location: 119338 - 123045 (-)
Type: CAZyme
Location: 119338 - 123045 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.