Cluster: HRGMv2_4304_CGC59
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_44 | HRGMv2_4304_44_4 | 3322 | 5583 | - | GT35 |
| TF | HRGMv2_4304_44 | HRGMv2_4304_44_5 | 5863 | 6876 | + | LacI |
| TC | HRGMv2_4304_44 | HRGMv2_4304_44_6 | 6848 | 8845 | - | 3.A.1.134.4 |
| TC | HRGMv2_4304_44 | HRGMv2_4304_44_7 | 8838 | 9605 | - | 3.A.1.134.4 |
Gene ID: HRGMv2_4304_44_4
Type: CAZyme
Location: 3322 - 5583 (-)
Type: CAZyme
Location: 3322 - 5583 (-)
Gene ID: HRGMv2_4304_44_5
Type: TF
Location: 5863 - 6876 (+)
Type: TF
Location: 5863 - 6876 (+)
Gene ID: HRGMv2_4304_44_6
Type: TC
Location: 6848 - 8845 (-)
Type: TC
Location: 6848 - 8845 (-)
Gene ID: HRGMv2_4304_44_7
Type: TC
Location: 8838 - 9605 (-)
Type: TC
Location: 8838 - 9605 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.