Cluster: HRGMv2_4304_CGC54
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_02071
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_37 | HRGMv2_4304_37_17 | 20917 | 26133 | + | CBM35 | CBM35 | GH39 |
| TC | HRGMv2_4304_37 | HRGMv2_4304_37_18 | 26270 | 27136 | + | 3.A.1.1.42 |
| TC | HRGMv2_4304_37 | HRGMv2_4304_37_19 | 27136 | 28005 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_4304_37 | HRGMv2_4304_37_20 | 28016 | 30115 | + | GH36 |
| CAZyme | HRGMv2_4304_37 | HRGMv2_4304_37_21 | 30212 | 37060 | + | GH127 |
Gene ID: HRGMv2_4304_37_17
Type: CAZyme
Location: 20917 - 26133 (+)
Type: CAZyme
Location: 20917 - 26133 (+)
Gene ID: HRGMv2_4304_37_18
Type: TC
Location: 26270 - 27136 (+)
Type: TC
Location: 26270 - 27136 (+)
Gene ID: HRGMv2_4304_37_19
Type: TC
Location: 27136 - 28005 (+)
Type: TC
Location: 27136 - 28005 (+)
Gene ID: HRGMv2_4304_37_20
Type: CAZyme
Location: 28016 - 30115 (+)
Type: CAZyme
Location: 28016 - 30115 (+)
Gene ID: HRGMv2_4304_37_21
Type: CAZyme
Location: 30212 - 37060 (+)
Type: CAZyme
Location: 30212 - 37060 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.